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Publications

featured publications

  • Neuronal Cell-type Engineering by Transcriptional Activation.

    Frontiers in genome editing

    Authors: Songlei Liu, Johannes Striebel, Giovanni Pasquini, Alex H M Ng, Parastoo Khoshakhlagh, George M Church, Volker Busskamp

  • Human brain organoids assemble functionally integrated bilateral optic vesicles.

    Cell stem cell

    Authors: Elke Gabriel, Walid Albanna, Giovanni Pasquini, Anand Ramani, Natasa Josipovic, Aruljothi Mariappan, Friedrich Schinzel, Celeste M Karch, Guobin Bao, Marco Gottardo, Ata Alp Suren, Jürgen Hescheler, Kerstin Nagel-Wolfrum, Veronica Persico, Silvio O Rizzoli, Janine Altmüller, Maria Giovanna Riparbelli, Giuliano Callaini, Olivier Goureau, Argyris Papantonis, Volker Busskamp, Toni Schneider, Jay Gopalakrishnan

  • MiRNA Regulatory Functions in Photoreceptors.

    Frontiers in cell and developmental biology

    Authors: Julia Sophie Pawlick, Marta Zuzic, Giovanni Pasquini, Anka Swiersy, Volker Busskamp

  • Automated methods for cell type annotation on scRNA-seq data.

    Computational and structural biotechnology journal

    Authors: Giovanni Pasquini, Jesus Eduardo Rojo Arias, Patrick Schäfer, Volker Busskamp

  • A comprehensive library of human transcription factors for cell fate engineering.

    Nature biotechnology

    Authors: Alex H M Ng, Parastoo Khoshakhlagh, Jesus Eduardo Rojo Arias, Giovanni Pasquini, Kai Wang, Anka Swiersy, Seth L Shipman, Evan Appleton, Kiavash Kiaee, Richie E Kohman, Andyna Vernet, Matthew Dysart, Kathleen Leeper, Wren Saylor, Jeremy Y Huang, Amanda Graveline, Jussi Taipale, David E Hill, Marc Vidal, Juan M Melero-Martin, Volker Busskamp, George M Church

  • The Rise of Retinal Organoids for Vision Research.

    International journal of molecular sciences

    Authors: Kritika Sharma, Tim U Krohne, Volker Busskamp

  • Whole transcriptomic network analysis using Co-expression Differential Network Analysis (CoDiNA).

    PloS one

    Authors: Deisy Morselli Gysi, Tiago de Miranda Fragoso, Fatemeh Zebardast, Wesley Bertoli, Volker Busskamp, Eivind Almaas, Katja Nowick

  • Primate-restricted KRAB zinc finger proteins and target retrotransposons control gene expression in human neurons.

    Science advances

    Authors: Priscilla Turelli, Christopher Playfoot, Dephine Grun, Charlène Raclot, Julien Pontis, Alexandre Coudray, Christian Thorball, Julien Duc, Eugenia V Pankevich, Bart Deplancke, Volker Busskamp, Didier Trono

  • Genetic Architecture of Parkinson's Disease in the Indian Population: Harnessing Genetic Diversity to Address Critical Gaps in Parkinson's Disease Research.

    Frontiers in neurology

    Authors: Roopa Rajan, K P Divya, Rukmini Mridula Kandadai, Ravi Yadav, Venkata P Satagopam, U K Madhusoodanan, Pankaj Agarwal, Niraj Kumar, Teresa Ferreira, Hrishikesh Kumar, A V Sreeram Prasad, Kuldeep Shetty, Sahil Mehta, Soaham Desai, Suresh Kumar, L K Prashanth, Mohit Bhatt, Pettarusp Wadia, Sudha Ramalingam, G M Wali, Sanjay Pandey, Felix Bartusch, Maximilian Hannussek, Jens Krüger, Ashwin Kumar-Sreelatha, Sandeep Grover, Peter Lichtner, Marc Sturm, Jochen Roeper, Volker Busskamp, Giriraj R Chandak, Jens Schwamborn, Pankaj Seth, Thomas Gasser, Olaf Riess, Vinay Goyal, Pramod Kumar Pal, Rupam Borgohain, Rejko Krüger, Asha Kishore, Manu Sharma

  • Using Transcriptomic Analysis to Assess Double-Strand Break Repair Activity: Towards Precise in vivo Genome Editing.

    International journal of molecular sciences

    Authors: Giovanni Pasquini, Virginia Cora, Anka Swiersy, Kevin Achberger, Lena Antkowiak, Brigitte Müller, Tobias Wimmer, Sabine Anne-Kristin Fraschka, Nicolas Casadei, Marius Ueffing, Stefan Liebau, Knut Stieger, Volker Busskamp