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Publications

featured publications

  • Unveiling the power of high-dimensional cytometry data with cyCONDOR.

    Nature communications

    Authors: Charlotte Kröger, Sophie Müller, Jacqueline Leidner, Theresa Kröber, Stefanie Warnat-Herresthal, Jannis Bastian Spintge, Timo Zajac, Anna Neubauer, Aleksej Frolov, Caterina Carraro, Frank Jessen, Simone Puccio, Anna C Aschenbrenner, Joachim L Schultze, Tal Pecht, Marc D Beyer, Lorenzo Bonaguro

  • Top publication

    The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation.

    Cell

    Authors: Rainer Knoll, Elisa T Helbig, Kilian Dahm, Olufemi Bolaji, Frederik Hamm, Oliver Dietrich, Martina van Uelft, Sophie Müller, Lorenzo Bonaguro, Jonas Schulte-Schrepping, Lev Petrov, Benjamin Krämer, Michael Kraut, Paula Stubbemann, Charlotte Thibeault, Sophia Brumhard, Heidi Theis, Gudrun Hack, Elena De Domenico, Jacob Nattermann, Matthias Becker, Marc D Beyer, David Hillus, Philipp Georg, Constantin Loers, Janina Tiedemann, Pinkus Tober-Lau, Lena Lippert, Belén Millet Pascual-Leone, Frank Tacke, Gernot Rohde, Norbert Suttorp, Martin Witzenrath, Antoine-Emmanuel Saliba, Thomas Ulas, Julia K Polansky, Birgit Sawitzki, Leif E Sander, Joachim L Schultze, Anna C Aschenbrenner, Florian Kurth

  • The pathophysiology of sepsis and precision-medicine-based immunotherapy.

    Nature immunology

    Authors: Evangelos J Giamarellos-Bourboulis, Anna C Aschenbrenner, Michael Bauer, Christoph Bock, Thierry Calandra, Irit Gat-Viks, Evdoxia Kyriazopoulou, Mihaela Lupse, Guillaume Monneret, Peter Pickkers, Joachim L Schultze, Tom van der Poll, Frank L van de Veerdonk, Alexander P J Vlaar, Sebastian Weis, W Joost Wiersinga, Mihai G Netea

  • Whole blood stimulation as a tool for studying the human immune system.

    European journal of immunology

    Authors: Sophie Müller, Charlotte Kröger, Joachim L Schultze, Anna C Aschenbrenner

  • Identification of drug candidates targeting monocyte reprogramming in people living with HIV.

    Frontiers in immunology

    Authors: Rainer Knoll, Lorenzo Bonaguro, Jéssica C Dos Santos, Stefanie Warnat-Herresthal, Maartje C P Jacobs-Cleophas, Edda Blümel, Nico Reusch, Arik Horne, Miriam Herbert, Melanie Nuesch-Germano, Twan Otten, Wouter A van der Heijden, Lisa van de Wijer, Alex K Shalek, Kristian Händler, Matthias Becker, Marc D Beyer, Mihai G Netea, Leo A B Joosten, Andre J A M van der Ven, Joachim L Schultze, Anna C Aschenbrenner

  • Understanding, diagnosing, and treating Myalgic encephalomyelitis/chronic fatigue syndrome - State of the art: Report of the 2nd international meeting at the Charité fatigue center.

    Autoimmunity reviews

    Authors: Sophie Steiner, Annick Fehrer, Friederike Hoheisel, Simon Schoening, Anna Aschenbrenner, Nina Babel, Judith Bellmann-Strobl, Carsten Finke, Øystein Fluge, Laura Froehlich, Andreas Goebel, Bettina Grande, Johannes-Peter Haas, Bettina Hohberger, Leonard A Jason, Anthony L Komaroff, Eliana Lacerda, Max Liebl, Andrea Maier, Olav Mella, Luis Nacul, Friedemann Paul, Bhupesh K Prusty, Christian Puta, Gabriela Riemekasten, Wolfgang Ries, Peter C Rowe, Birgit Sawitzki, Yehuda Shoenfeld, Joachim L Schultze, Martina Seifert, Nuno Sepúlveda, Franziska Sotzny, Elisa Stein, Michael Stingl, Friederike Ufer, Christian Veauthier, Francisco Westermeier, Klaus Wirth, Bernd Wolfarth, Pawel Zalewski, Uta Behrends, Carmen Scheibenbogen

  • Chromatin accessibility profiling of targeted cell populations with laser capture microdissection coupled to ATAC-seq.

    Cell reports methods

    Authors: Caterina Carraro, Lorenzo Bonaguro, Rachana Srinivasa, Martina van Uelft, Victoria Isakzai, Jonas Schulte-Schrepping, Prerna Gambhir, Tarek Elmzzahi, Jessica V Montgomery, Hannah Hayer, Yuanfang Li, Heidi Theis, Michael Kraut, Krishnaa T Mahbubani, Anna C Aschenbrenner, Ireen König, Eugenio Fava, Hans-Ulrich Fried, Elena De Domenico, Marc Beyer, Adem Saglam, Joachim L Schultze

  • Molecular mechanisms and treatment responses of pulmonary fibrosis in severe COVID-19.

    Respiratory research

    Authors: Emma J Kooistra, Kilian Dahm, Antonius E van Herwaarden, Jelle Gerretsen, Melanie Nuesch Germano, Karoline Mauer, Ruben L Smeets, Sjef van der Velde, Maarten J W van den Berg, Johannes G van der Hoeven, Anna C Aschenbrenner, Joachim L Schultze, Thomas Ulas, Matthijs Kox, Peter Pickkers

  • Fighting Post-COVID and ME/CFS - development of curative therapies.

    Frontiers in medicine

    Authors: Carmen Scheibenbogen, Judith Theresia Bellmann-Strobl, Cornelia Heindrich, Kirsten Wittke, Elisa Stein, Christiana Franke, Harald Prüss, Hannah Preßler, Marie-Luise Machule, Heinrich Audebert, Carsten Finke, Hanna Gwendolyn Zimmermann, Birgit Sawitzki, Christian Meisel, Markus Toelle, Anne Krueger, Anna C Aschenbrenner, Joachim L Schultze, Marc D Beyer, Markus Ralser, Michael Mülleder, Leif Erik Sander, Frank Konietschke, Friedemann Paul, Silvia Stojanov, Lisa Bruckert, Dennis M Hedderich, Franziska Knolle, Gabriela Riemekasten, Maria J G T Vehreschild, Oliver A Cornely, Uta Behrends, Susen Burock

  • huva: A human variation analysis framework to predict gene perturbation from population-scale multi-omics data.

    STAR protocols

    Authors: Anna C Aschenbrenner, Lorenzo Bonaguro