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Publications

featured publications

  • Top publication

    The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation.

    Cell

    Authors: Rainer Knoll, Elisa T Helbig, Kilian Dahm, Olufemi Bolaji, Frederik Hamm, Oliver Dietrich, Martina van Uelft, Sophie Müller, Lorenzo Bonaguro, Jonas Schulte-Schrepping, Lev Petrov, Benjamin Krämer, Michael Kraut, Paula Stubbemann, Charlotte Thibeault, Sophia Brumhard, Heidi Theis, Gudrun Hack, Elena De Domenico, Jacob Nattermann, Matthias Becker, Marc D Beyer, David Hillus, Philipp Georg, Constantin Loers, Janina Tiedemann, Pinkus Tober-Lau, Lena Lippert, Belén Millet Pascual-Leone, Frank Tacke, Gernot Rohde, Norbert Suttorp, Martin Witzenrath, Antoine-Emmanuel Saliba, Thomas Ulas, Julia K Polansky, Birgit Sawitzki, Leif E Sander, Joachim L Schultze, Anna C Aschenbrenner, Florian Kurth

  • Extracellular matrix remodelling pathway in peripheral blood mononuclear cells from severe COVID-19 patients: an explorative study.

    Frontiers in immunology

    Authors: Sarah Louise Murphy, Nora Reka Balzer, Trine Ranheim, Ellen Lund Sagen, Camilla Huse, Vigdis Bjerkeli, Annika E Michelsen, Ane-Kristine Finbråten, Lars Heggelund, Anne Ma Dyrhol-Riise, Anders Tveita, Aleksander Rygh Holten, Marius Trøseid, Thor Ueland, Thomas Ulas, Pål Aukrust, Andreas Barratt-Due, Bente Halvorsen, Tuva Børresdatter Dahl

  • Differential cell type-specific function of the aryl hydrocarbon receptor and its repressor in diet-induced obesity and fibrosis.

    Molecular metabolism

    Authors: Frederike J Graelmann, Fabian Gondorf, Yasmin Majlesain, Birte Niemann, Katarina Klepac, Dominic Gosejacob, Marlene Gottschalk, Michelle Mayer, Irina Iriady, Philip Hatzfeld, Sophie K Lindenberg, Klaus Wunderling, Christoph Thiele, Zeinab Abdullah, Wei He, Karsten Hiller, Kristian Händler, Marc D Beyer, Thomas Ulas, Alexander Pfeifer, Charlotte Esser, Heike Weighardt, Irmgard Förster, Laia Reverte-Salisa

  • hCoCena: A toolbox for network-based co-expression analysis and horizontal integration of transcriptomic datasets.

    STAR protocols

    Authors: Lisa Holsten, Kilian Dahm, Marie Oestreich, Matthias Becker, Thomas Ulas

  • Molecular mechanisms and treatment responses of pulmonary fibrosis in severe COVID-19.

    Respiratory research

    Authors: Emma J Kooistra, Kilian Dahm, Antonius E van Herwaarden, Jelle Gerretsen, Melanie Nuesch Germano, Karoline Mauer, Ruben L Smeets, Sjef van der Velde, Maarten J W van den Berg, Johannes G van der Hoeven, Anna C Aschenbrenner, Joachim L Schultze, Thomas Ulas, Matthijs Kox, Peter Pickkers

  • Identification of the novel FOXP3-dependent T cell transcription factor MEOX1 by high-dimensional analysis of human CD4 T cells.

    Frontiers in immunology

    Authors: Kevin Baßler, Lisa Schmidleithner, Mehrnoush Hadaddzadeh Shakiba, Tarek Elmzzahi, Maren Köhne, Stefan Floess, Rebekka Scholz, Naganari Ohkura, Timothy Sadlon, Kathrin Klee, Anna Neubauer, Shimon Sakaguchi, Simon C Barry, Jochen Huehn, Lorenzo Bonaguro, Thomas Ulas, Marc Beyer

  • Top publication

    Systemic alterations in neutrophils and their precursors in early-stage chronic obstructive pulmonary disease.

    Cell reports

    Authors: Theodore S Kapellos, Kevin Baßler, Wataru Fujii, Christina Nalkurthi, Anna C Schaar, Lorenzo Bonaguro, Tal Pecht, Izabela Galvao, Shobhit Agrawal, Adem Saglam, Erica Dudkin, Amit Frishberg, Elena de Domenico, Arik Horne, Chantal Donovan, Richard Y Kim, David Gallego-Ortega, Tessa E Gillett, Meshal Ansari, Jonas Schulte-Schrepping, Nina Offermann, Ignazio Antignano, Burcu Sivri, Wenying Lu, Mathew S Eapen, Martina van Uelft, Collins Osei-Sarpong, Maarten van den Berge, Hylke C Donker, Harry J M Groen, Sukhwinder S Sohal, Johanna Klein, Tina Schreiber, Andreas Feißt, Ali Önder Yildirim, Herbert B Schiller, Martijn C Nawijn, Matthias Becker, Kristian Händler, Marc Beyer, Melania Capasso, Thomas Ulas, Jan Hasenauer, Carmen Pizarro, Fabian J Theis, Philip M Hansbro, Dirk Skowasch, Joachim L Schultze

  • Circuit-selective cell-autonomous regulation of inhibition in pyramidal neurons by Ste20-like kinase.

    Cell reports

    Authors: Pedro Royero, Anne Quatraccioni, Rieke Früngel, Mariella Hurtado Silva, Arco Bast, Thomas Ulas, Marc Beyer, Thoralf Opitz, Joachim L Schultze, Mark E Graham, Marcel Oberlaender, Albert Becker, Susanne Schoch, Heinz Beck

  • BCL7A-containing SWI/SNF/BAF complexes modulate mitochondrial bioenergetics during neural progenitor differentiation.

    The EMBO journal

    Authors: Lena Wischhof, Hang-Mao Lee, Janine Tutas, Clemens Overkott, Eileen Tedt, Miriam Stork, Michael Peitz, Oliver Brüstle, Thomas Ulas, Kristian Händler, Joachim L Schultze, Dan Ehninger, Pierluigi Nicotera, Paolo Salomoni, Daniele Bano

  • hCoCena: horizontal integration and analysis of transcriptomics datasets.

    Bioinformatics (Oxford, England)

    Authors: Marie Oestreich, Lisa Holsten, Shobhit Agrawal, Kilian Dahm, Philipp Koch, Han Jin, Matthias Becker, Thomas Ulas